BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005B01SP1|AL425324
(951 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1482 1770 0.0
>3x_Contig1482
Length = 10060
Score = 1770 bits (881), Expect = 0.0
Identities = 924/951 (97%)
Strand = Plus / Minus
Query: 1 gaaacgtacgctgcttaamgtttagacgatagccaagatgcttcaagagaataatccgtc 60
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1180 gaaacgtacgctgcttaaagtttagacgatagcaaagatgcttcaagagaataatccgtc 1121
Query: 61 ttatatatmttcctatatataamtcaccaggtattcctgatgattaagaatcagtcttaa 120
|||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 1120 ttatatatattcctatatataaataaccaggtattcctgatgattaagaatcagtcttaa 1061
Query: 121 atcgatttcatgagacaatmaggmaatgtccgggtaacggatgatgaaaagtggtggtat 180
||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1060 atcgatttcatgagaaaataaggaaatgtccgggtaacggatgatgaaaagtggtggtat 1001
Query: 181 tatttactacttgggmcatggatatttactacggtggattgctgatgactggctatmaca 240
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1000 tatttactacttgggacatggatatttactacggtggattgctgatgactggctataaca 941
Query: 241 tcttgaacttgattgactttattgtggggatgatccatgggtgttgttcttggtttagtt 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 tcttgaacttgattgaatttattgtggggatgatccatgggtgttgttcttggtttagtt 881
Query: 301 cttccmgtgattgtcaaagcggttcgttcgttatgattaacgggctgccatggtctttta 360
||||| |||||||| ||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 880 cttccagtgattgtaaaagcggttcgttcgttatgattaaagggctgcaatggtctttta 821
Query: 361 atttgtccmamatgctcagtagaaccggttggmatgtgctgtcctttacacagtctttga 420
|||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 820 atttgtccaaaatgctcagtagaaccggttggaatgtgctgtcctttacacagtctttga 761
Query: 421 gcccatattgtaggtacggtatgattagtgtgaggacaaacacttggtctagatttagcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 gcccatattgtaggtacggtatgattagtgtgaggacaaacacttggtctagatttagcg 701
Query: 481 ggtcatcgamatttagtagcgagtctatyagggaccmgagttgccacctgaggtttaatg 540
||||||||| |||||||||||||||||| ||||||| ||||||| |||||||||||||||
Sbjct: 700 ggtcatcgaaatttagtagcgagtctattagggaccagagttgcaacctgaggtttaatg 641
Query: 541 cgtcatcctgtcgttgcttcmmgttccccacttgaatcacttggacaaaccgtttcattg 600
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 640 cgtcatcctgtcgttgcttcaagttccccacttgaatcacttggacaaaccgtttcattg 581
Query: 601 gtttgaggaaggtgacggatctgggtagamactggactactgcmtctgttggtagtcttg 660
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 580 gtttgaggaaggtgacggatctgggtagaaactggactactgcatctgttggtagtcttg 521
Query: 661 atgccatggtgatgagccattgccattggaaaagagtgaattcagattccaagatttggt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 atgccatggtgatgagccattgccattggaaaagagtgaattcagattccaagatttggt 461
Query: 721 caatgattgattttgtaagattgagatcgtaatcctgatactctttgagccatgtttcca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 caatgattgattttgtaagattgagatcgtaatcctgatactctttgagccatgtttcca 401
Query: 781 acagttcttcggaatctgccggtgtggaaacgagtatttcggagtacaatctcggtggtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 acagttcttcggaatctgccggtgtggaaacgagtatttcggagtacaatctcggtggtt 341
Query: 841 gcgttatctgagaggatggtgtagtggtttgatgttgctgtgtgaaagatgatgcagagc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gcgttatctgagaggatggtgtagtggtttgatgttgctgtgtgaaagatgatgcagagc 281
Query: 901 tgatcaacgattcgaactgggagatcacttcgttcacttcttccyggttcc 951
|||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 280 tgatcaacgattcgaactgggagatcacttcgttcacttcttcctggttcc 230
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4994
Number of Sequences: 1807
Number of extensions: 4994
Number of successful extensions: 25
Number of sequences better than 1.0e-20: 1
length of query: 951
length of database: 10,358,551
effective HSP length: 16
effective length of query: 935
effective length of database: 10,329,639
effective search space: 9658212465
effective search space used: 9658212465
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)